Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKILIVNSIYYTEIANLLLEGATDKLKGSNASYNVIEVPGAFEIPAAILFAVKSKH---FNYDGYLALGCVIRGETDHYQYICKGVIKGLNEVVMHNTVPLGMGVITADSKDKALVRADKDKKNIGGRTASAVLHMIDLYNKLR
2F59 Chain:A ((15-155))
---LLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESIAIGNGILTVENEEQAWVHARREDKDKGGFAARAALTMIGLRKKFG
General information:
TITO was launched using:
RESULT:
Template:
2F59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126429 for 1172 contacts (-107.9/contact) +
2D Compatibility (PS) -14903 + (NN) -7930 + (LL) 244
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -164118.0 ( -140.03 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2F59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F59-query.scw
PDB file :
Tito_Scwrl_2F59.pdb
: