Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSLYLRSHSLSKLNSSLFAVNNNQNVEPRSDISTGLFKLKNSVYPPTFTMGSHLSNNK-ILPLYCQNHGHDNMQYYNIIIWITTMLKA
1B8W Chain:A ((23-36))
--------------------------------------------------------NCREIFLADCYNDGQKCCRK-------------
General information:
TITO was launched using:
RESULT:
Template:
1B8W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1496 for 26 contacts (-57.5/contact) +
2D Compatibility (PS) -1400 + (NN) -532 + (LL) 3824
1D Compatibility (HY) -400 + (ID) 250
Total energy: -254.0 ( -9.77 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_1B8W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B8W-query.scw
PDB file :
Tito_Scwrl_1B8W.pdb
: