Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEWNTNNIIDATGGRGKSGCHNLNISTDTRNIKKGDLFIALKGKNFDGHDFLHEAFLKGAAAAVVSED-KYRNLPVIVVQDTLKALHDMASYYIRNVLVNAEVIAITGSVGKTTTKDMLHTVL-SQYGVSH---VNDGNLNNNIGLPLTILKAPENCRYLILEMGMNKAGEIKELSKISNPNIAVITNIEPVHVENFSSLFDIAQAKLEILYGVKNNGTLILNKDNKYYDYLLSHVD-RDVVSFGRSESATVCLLNVIKNDKGLNLKIRLNN-NQIMNCNLCVQGKHFVYSVLAVVAVIQNLGLNLSKLPLALENFNITKGRGSVHKAKYNGKCIHLIDDSYNASPASMKAAIRTLGIYSNRRKVALLGDMLELGNKSITFHMKLLDSIVKYDVDKVYTVGKFMLKLHRLLPGNIKGTHFNDSNQLKSNLANIVQNNDVVLVKGSRGVKMDFIVQGFIIEY |
| 4CVM Chain:A ((28-447)) | -------------------------VSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQLLVRDTRAALGRLGALNRRKF--TGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRSAVIELGASRIGEIAYTVELTRPHVAIITNAGTAHV---GGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPVKGRAV---AQLTASGLRVIDDSYNANPASMLAAIDILSGFSG-RTVLVLGDMG-----AEQAHRE-VGAYAAGKVSALYAVGPLM--AHAVQAFGATGRHFADQASLIGALAT-EDPTTTILIKGSRSAAMDKVVAALC--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281665 for 3510 contacts (-80.2/contact) +
2D Compatibility (PS) -43205 + (NN) -13644 + (LL) 2220
1D Compatibility (HY) -15200 + (ID) 7400
Total energy: -358894.0 ( -102.25 by residue)
QMean score : 0.470
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