Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKALNVCY---IGSKIKLLIETCANNRENTTQLYGFINKEEQSCLRLLVKVSGVSYKTAMSILSKLTPEQLFLAIMNEDKIAL-KISGLGPKLINRIITELSGKVSKLETNNNNFYP------------INEDAVSALINLGYEKTKVYDTIKK-YKPNLDTKDIIRTALKELSNYEIDIMQ
1C7Y Chain:A ((1-200))
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPM----TCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGL--HGDLFTPAADLVLTSATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL--------
General information:
TITO was launched using:
RESULT:
Template:
1C7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140416 for 1292 contacts (-108.7/contact) +
2D Compatibility (PS) -19433 + (NN) -8524 + (LL) 956
1D Compatibility (HY) -10000 + (ID) 2900
Total energy: -180317.0 ( -139.56 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1C7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C7Y-query.scw
PDB file :
Tito_Scwrl_1C7Y.pdb
: