Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKMYEECGVFGIS----CNKDSAFDSILGLHALQHRGQESFGVVTSN-NDKLHSYHFQGQVSSVLDNIDEIKKSLPGNYAIGHVRYSTSGNKSG--VQPILGKSNKFGDFAIAHNGNLINISPIREQLIKQGRV-FQSDIDTEVVARLVEANTKN---------SFLGSFIYALKQIQGAYSFVA-INREVVVGVRDSAGIRPLVLGKLN-----SSYVLASETCALDIVNAEFIREIEPGELVTIDQNGNLASAFPLSQQKSSFCIFEYIYFSRPDSIIEDRSIYDIRKEIGRTLAEESPPKN---NVDMVVPIPDSGIPAAIGYTKYSGLPIELGIIRNHYIGRTFIQPTAEVRKVRIKLKFNANKDILKGKNIILIDDSIVRGSTLKSIIVMLKDAGVKEIHLKISSPPIKYSCFYGIDTPECKDLIAASKSVREIEAIIGVNSLTFLSIDGLYQAVNGEKRNNTAPQYCDACFTGDYPIGK |
| 1ECG Chain:A ((1-465)) | --------CGIVGIAGVMPVNQ-SIYDA---LTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEA--RHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNS-PYG-ITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE--NPDIQQFECSVFNGVYVTKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -301570 for 3990 contacts (-75.6/contact) +
2D Compatibility (PS) -46697 + (NN) -13141 + (LL) 1148
1D Compatibility (HY) -36000 + (ID) 8450
Total energy: -404710.0 ( -101.43 by residue)
QMean score : 0.474
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