Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLLINNFDELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYR--TCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
4RL4 Chain:A ((18-193)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------QGHMKRLEVSNQAKLPTQFGEFYIQCFREKGS---KDH--LVVFTPNFSQNPLVRLHSECLTGDALGSQKCDCGGALQMALERISKEG-GLVIYLRQEGRGIGLFNKVNAYALQDK-GYDTIQANEMIGFKDDERDYSVAGEILEYYRIKKMRLLTNNPKKIAALEKYA-EVTR-ESLIVCA---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63604 for 1257 contacts (-50.6/contact) +
2D Compatibility (PS) -18646 + (NN) -7955 + (LL) 13848
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -95457.0 ( -75.94 by residue)
QMean score : 0.463
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