Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWD---VDVVLECTGAFNKRAEAAKHNTG---KVIVSAPVS-DADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKN----SVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTGDICRVAAWYDNEWAFSLRMLDIALLCYNRI |
3GNQ Chain:A ((10-342)) | -TIRVAINGYGRIGRNTLRAFYENGKKHD-LEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSVDG--DYLVVNGDRIRVLANRNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCLAPLVKPLNDKIGLETGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTINVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDATLTKVSGRLVKVSSWYDNEWGFSNRMLDTAIALANAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247578 for 2767 contacts (-89.5/contact) +
2D Compatibility (PS) -34274 + (NN) -5650 + (LL) 404
1D Compatibility (HY) -26000 + (ID) 8500
Total energy: -321598.0 ( -116.23 by residue)
QMean score : 0.485
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