Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRLEGRKFLVTGASGGIGQAIVKTMHKAGAILCVSGTKKETLEGVAKLYEKNIYILPCNLLNTEEVNQLINRASKLMGGLDGLVCNAGVTQDSLLLRMTDEAWQKVVDINLSSTFKLNREAYKKLTKNNWGRIINISSIIGLTGNAGQANYAASKAGIIAMSKSIAKEVASRNITVNCIAPGFMDTKMTKILTEEQKKKILDNIPMKRMGTGEEIAAGVLFLASDEAKYITGHVLNINGGLFM
3F9I Chain:A ((1-240))
MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNL----DILVCNAG-------------DFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG--GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIK------LNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGMLM
General information:
TITO was launched using:
RESULT:
Template:
3F9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162529 for 1885 contacts (-86.2/contact) +
2D Compatibility (PS) -23801 + (NN) -8911 + (LL) 2088
1D Compatibility (HY) -23200 + (ID) 5750
Total energy: -222103.0 ( -117.83 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_3F9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9I-query.scw
PDB file :
Tito_Scwrl_3F9I.pdb
: