Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTQYNNLVSSYARALFLVSENKLSVVRKEVEFLLAFFKSQHDVFIYLSHPMISFARKKEVIFSVNEHLSESLVKFIAVIFANKRSNLLISVLEKFLTLVRESENELEITIKSAETLSESNIKIITESLSFLGKIVRVDNAVDPSILGGFIVKYGFNLIDASLKSYLDRLVDLSKVEILKTRNFI
1ABV Chain:A ((64-105))
-----------------------------------------------------------------CGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT-------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ABV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14290 for 187 contacts (-76.4/contact) +
2D Compatibility (PS) -4503 + (NN) -3145 + (LL) 12452
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -12686.0 ( -67.84 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1ABV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ABV-query.scw
PDB file :
Tito_Scwrl_1ABV.pdb
: