Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKKVFCGVVTKAKCDKTVKVSVLRVYKDKLYKKVIKRYKEYTVHDENNSCKEGDKVFIQEHRPISATKKWVIVRVE
1HR0 Chain:Q ((2-76))
-PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLV
General information:
TITO was launched using:
RESULT:
Template:
1HR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20681 for 456 contacts (-45.4/contact) +
2D Compatibility (PS) -8095 + (NN) -396 + (LL) 208
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -36814.0 ( -80.73 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1HR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HR0-query.scw
PDB file :
Tito_Scwrl_1HR0.pdb
: