Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLVRKGRLKLSCKKKVPALGKSNPQRRGVCTKVYTTTPRKPNSALRKVARVRISGYGEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGALDLRGVQNRKKARSKYGVKKSS
4K0K Chain:L ((1-120))
-PTINQLVRKGREKVRKKSKVPAL-KGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK
General information:
TITO was launched using:
RESULT:
Template:
4K0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26811 for 789 contacts (-34.0/contact) +
2D Compatibility (PS) -12960 + (NN) -6585 + (LL) 36
1D Compatibility (HY) -9600 + (ID) 4650
Total energy: -60570.0 ( -76.77 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_4K0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K0K-query.scw
PDB file :
Tito_Scwrl_4K0K.pdb
: