Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSEKIELIFEKLKQSNPIPKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANTPEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRKSANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEKD-VFKTEKSLLNVVPKKYLLYAHHWLVLHGRYVCKAQKPSCKTCIIHDLCEFECKRYKV
1P59 Chain:A ((8-216))
---QQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSTAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRK
General information:
TITO was launched using:
RESULT:
Template:
1P59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129631 for 1667 contacts (-77.8/contact) +
2D Compatibility (PS) -21725 + (NN) -12866 + (LL) 104
1D Compatibility (HY) -21200 + (ID) 4300
Total energy: -189618.0 ( -113.75 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1P59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P59-query.scw
PDB file :
Tito_Scwrl_1P59.pdb
: