Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEVGAGTLHPATIMSAIDVKPTKIAYLQPVVRPADGRYGDNPNRLYQHHQYQVIIKPSGNNLQDVYLSSLRALGISTEKYDIKFIEDDWENPSVGASGLGWEVTCNGMEVTQLTYIQQIGSINCRIIPGEVAYGLERLAMCIQGVNNVYDIIWND-NG--ITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
3RGL Chain:A ((31-303)) | ------ILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLGKKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYGLERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCAEIYKKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134217 for 2166 contacts (-62.0/contact) +
2D Compatibility (PS) -29186 + (NN) -11464 + (LL) 600
1D Compatibility (HY) -29600 + (ID) 6750
Total energy: -210617.0 ( -97.24 by residue)
QMean score : 0.518
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