Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTLVNILFIMIPLLFSVAYLVYFERKVIGAIQLRHGPSVVGPFGLLQPFADAIKLLVKEPIIPFRANTILFIMAPMLTFILALIVWAVIPFGAEVITENGQQIVIPKVIANVNIGVLYVLAISSLGIYGIIVAGWSSNSNYAFLGSIRSAAQMISYEVSMGLIVATVVITTGTLNLGEMVATKHSMPFWIDLLMMPIGVVFFISLLAETNRHPFDLPEAEAELVSGYNVEYSSMPFALFFLGEYANMILGSAMMTIFFLGGWYPPLKLSLLYKIPGLIWFVLKIVLLLFIFVWTRATIPRYRYDQLMRLGWKVFLPISVLWVILISGVLLFTGNLPGRGL |
| 4HEA Chain:H ((15-325)) | ----LKALLVVVGLLTAFAFMTLIERRLLARFQVRMGPNRVGPFGLLQPLADAIKSIFKEDIVVAQADRFLFVLAPLISVVFALLAFGLIPFGPPGSFFGYQPWVI-----NLDLGILYLFAVSELAVYGIFLSGWASGSKYSLLGSLRSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKEHG-WLFLYAFPAFLVYLIASMAEAARTPFDLPEAEQELVGGYHTEYSSIKWALFQMAEYIHFITASALIPTLFLGGWTMP-----VLEVPYL-WMFLKIAFFLFFFIWIRATWFRLRYDQLLRFGWGFLFPLALLWFLVTALVVALDLPRTYLLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190671 for 2136 contacts (-89.3/contact) +
2D Compatibility (PS) -32095 + (NN) 11421 + (LL) 1720
1D Compatibility (HY) 9200 + (ID) 1250
Total energy: -201675.0 ( -94.42 by residue)
QMean score : -0.009
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