Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSPCPRAKVCFSPGEDCAVLIISEIDQSKESVLVQEYTFTLETIARALINAKERSVDVEVILDKSQLHSKYSV--INKLFSNGIPVWIDDKPKIAHNKVIIVDNQKVITGSFNLTKTAKKGNAENLLIIKNYPELVQQYVKNWEIRKSQSYKYAS
1BYS Chain:A ((3-153))
-----PSVQVGYSPEGSARVLVLSAIDSAKTSIRMMAYSFTAPDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTDSNFPIQHDKVIIVDNVTVETGSFNFTKAAETKNSENAVVIWNMPKLAESFLEHWQDRWNQGRDYRS
General information:
TITO was launched using:
RESULT:
Template:
1BYS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72028 for 1237 contacts (-58.2/contact) +
2D Compatibility (PS) -16567 + (NN) -8449 + (LL) 272
1D Compatibility (HY) -10800 + (ID) 3000
Total energy: -110572.0 ( -89.39 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1BYS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BYS-query.scw
PDB file :
Tito_Scwrl_1BYS.pdb
: