Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNENSNIIAVGFFDYSCGYCKAIKDDIKQLIND-GKIKYIFRDTPILGNNSLKAAKSALAVYFIDKGKYFDFHYAILDHKGEFSDENILDIVKSIGINEDNFNNSMKNNAGKIEQMINDSKFLVRELGAGGTPFLIIGDSLFIGATDLDVLRKKVDELSHKQN |
4GXZ Chain:A ((28-184)) | -----------------------------------------------------------------------------------DPASPRIGAKHPKLTLVNFTDYNCPYCKQLDPMLEKIVQKYPDVAVIIKPLPFKGESSVLAARIALTTWREHPQQFLALHEKLMQKRVYHTDDSIKQAQQKAGATPVTLDE-------KSMETIRTNLQLARLVGVQGTPATIIGDELIPGAVPWDTLEAVVKEKLASA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GXZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95072 for 1240 contacts (-76.7/contact) +
2D Compatibility (PS) -16827 + (NN) -10365 + (LL) 6648
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -122966.0 ( -99.17 by residue)
QMean score : 0.604
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