Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHVAIYMLLLCMSAMLYRIAKLSDIYNKALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL
1JB3 Chain:A ((39-58))
--------------VRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVNPAPQYMWPAHRNELM
General information:
TITO was launched using:
RESULT:
Template:
1JB3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5104 for 69 contacts (-74.0/contact) +
2D Compatibility (PS) -1692 + (NN) 2686 + (LL) 2060
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -4250.0 ( -61.59 by residue)
QMean score : 0.169
(partial model without unconserved sides chains):
PDB file :
Tito_1JB3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JB3-query.scw
PDB file :
Tito_Scwrl_1JB3.pdb
: