Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNMAEIKKDVAVIMGSESDYSTMIHAVDMLTELGILHDVFIISAHRTPERLFNFAQSAQEKGFRVIIAGAGGAAHLPGMVASLTCLPVIGVPVHSKQLNGLDSLLSIVQMPKGVPVATMSIGESGAYNAAIAAASVLSISNSEIADRLKKWRKEQTEVVKEKPASQ
2FWJ Chain:A ((25-179))
----------VGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI--
General information:
TITO was launched using:
RESULT:
Template:
2FWJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164147 for 1286 contacts (-127.6/contact) +
2D Compatibility (PS) -16909 + (NN) -5762 + (LL) 1108
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -206010.0 ( -160.19 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_2FWJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWJ-query.scw
PDB file :
Tito_Scwrl_2FWJ.pdb
: