Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEIDYHKITIVMTNGQEF------ETRSTYGKEGDKIKLDRDPLTHPAWTGSLTSGSTNKTSKIAKFNDKYGNIF
4C7O Chain:A ((62-123))
------HEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKK
General information:
TITO was launched using:
RESULT:
Template:
4C7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6073 for 194 contacts (31.3/contact) +
2D Compatibility (PS) -5534 + (NN) 601 + (LL) 676
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -1034.0 ( -5.33 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_4C7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C7O-query.scw
PDB file :
Tito_Scwrl_4C7O.pdb
: