Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNFKSVVLCILDGWGNGIGDSKY-NAISNANPPCWQYISSNYPRCSLSACGTDVGLPDGQIGNSEVGHMNICSGRVVMQSLQRIDREIKTIENNKN--LRSFISDLKDKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHEIK-VVIHAFLDGRDTLPNSGKKCVQEFEENIKGNDI-RIATVSGRYYAMDRDNRWERTIETYEAIAFARATCHNNVMSLIDNNYQNNITDEFIRPTVIGDYKG-----IELKDGVLLANFRADRMIQLASILLGKTGYTEV------AKFSSILSMMKYKEDLQIPCLFPPAFFTNTLGEIIADNKLRQLRIAETEKYAHVTFFFNCGKEEPFSNEERILIPSPKVETYDLQPEMSAFELTEKLVGKIRSQEFTLIVANYANPDMVGHTGNMEAAKKAVLAVDDCLAKVLNTVKEINDAVLIVTADHGNVECMFDEKNNTPHTAHTLNKVPFIIYPNSCNNLKLKDGR-LSDIAPTILQLLGIKKPDEMTGSSLIV |
1EQJ Chain:A ((3-510)) | --KKPVALIILDGFA--LRDETYGNAVAQANKPNFDRYWNEYPHTTLKACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRINIAIREGEFDRNETFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPLECIEDSYKHGIYDEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNED-FREFDRGPKHPKHLFFVCLTHFSETVAGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILA-KGGIAIITADHGNADEVL-TPDGKPQTAHTTNPVPVIV---TKKGIKLRDGGILGDLAPTMLDLLGLPQPKEMTGKSLIV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -289674 for 4672 contacts (-62.0/contact) +
2D Compatibility (PS) -51800 + (NN) -7703 + (LL) -296
1D Compatibility (HY) -44800 + (ID) 11200
Total energy: -405473.0 ( -86.79 by residue)
QMean score : 0.490
|
|
|