Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFKIFYVPFIILLVAFGYIFLTLRFKFLNIRMFKHAFTILCGKYDTDHHDGHITHFQAFVIALSSTVGLGTVAGVAIAVSMGGPGAIPWMMITGFFGMSAKFAEVTLAFRHRTEGQEQLFSGPFQYIRNGLEEFGFKKLGIILAAVYAVFFVLSGLGGSVAFQTNQMVSILSGYSNWVDSHPWFLSSIISALLALVIIGGIRRIARVSSALVPVMSLIYIFSCITIITFNIHNFSNVFKILFSNMIDFNAVGGGVVGAFVAGIQRAIFASEAGVGSASITHAVAKDEEPVRTGLVAMIEPCFDTMLICCLTGITIVITGAYQTGIGEGILVTQKAFETVSSWFPIFLIIA-APLFAFSSVISFVYCCEMGWLY-LFGAKSIVIYRIAVVVVAFFSGLSKDIMAIANIGGTLFSCLALINMTALILFSSQINDEVQCYSKRLRNNKIN |
| 2KSA Chain:A ((56-122)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37590 for 336 contacts (-111.9/contact) +
2D Compatibility (PS) -6146 + (NN) 2550 + (LL) 26828
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -23058.0 ( -68.62 by residue)
QMean score : -0.073
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