Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSFFVFLIFFSVSALASVSDVQLKEKYRDWLVYTALEDGEK---------VCYIVSYPKKKSEHYTTNRKPYVMVSYVDKKADEVSVTSGFQ---YDKEPIVLNIDKKIKYALYIIQGDLAWTEHTKTDRDLILKMKQGLSMVVSGRIKATTIDDTYSLLGFQKAYQKMHDLCYVK |
| 3B2M Chain:A ((230-306)) | -----------------------------DQLYHFTLKDGESIKVTNLPVGVDYVVTEDDYKSEKYTTN----VEVSPQDGAVKNIAGNSTEQETSTDKDMTITFTNKKVF------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2774 for 309 contacts (9.0/contact) +
2D Compatibility (PS) -7309 + (NN) -132 + (LL) 8612
1D Compatibility (HY) 0 + (ID) 1300
Total energy: 2645.0 ( 8.56 by residue)
QMean score : 0.239
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