Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALNPLEQFKIHTIVELPKLFGHDINFTN-SSLFMMISVVSVILFLLLGVRKGAVIPGYLQAAVEYVYDFITSIIESNTGSKGLKHIPLVFTVFTFTLSCNLVGMLPYSFTVTSHVIVTFALSMIVFTYTTIVGFKEKGINFLRILLPEGIPSWLAPMMVFIKLFAYLARPISLSIRLAANMIAGHTIIKVVAGFIMNMHLILTPIPFLFIIALIGFEVFVAILQAYIFTILTCIYLSDAVK |
| 4FYP Chain:A ((34-120)) | ---------------------GLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPGRVFKLPNPLYYVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30481 for 400 contacts (-76.2/contact) +
2D Compatibility (PS) -8314 + (NN) 5854 + (LL) 2112
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -34429.0 ( -86.07 by residue)
QMean score : -0.018
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