Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSDDKEERLLSEKHKSNPSMAVKWQRNIFTKTESQSSSKLYLVDLAKKSHKIISTPTSAYLPDWSHF
3J8X Chain:K ((217-249))
------------------------------TQTEQKLSGKLYLVDLA-GSEKVSKTGAEGAVLDEAKN
General information:
TITO was launched using:
RESULT:
Template:
3J8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129 for 93 contacts (-1.4/contact) +
2D Compatibility (PS) -3411 + (NN) 56 + (LL) 2092
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -4192.0 ( -45.08 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_3J8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J8X-query.scw
PDB file :
Tito_Scwrl_3J8X.pdb
: