Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEALKRVGTDFVLKTKDLFTPSESQVYVKDLRKVMIYKDGRKCRYPKNYDQVVESGKVIENKDMHGNSVLDKDRNPTYRLLYGNKNKDGWPIFELTKIMEIGDKSYFTIKFLVDKGKVSKGKCDNNDYHSFYKPFGFLKIDLEKYLPVFEAQKTKKSTCSFEFTNSSVPTKKTKNKKSNEVKEIVDEKERNGELLYTSDYKKLSTSFFEIRDQSNNLELGKSIISVPIVFAAGLAKICAKLLTYIPMELGEYLIGKQSLIAKFFGYFFLFTPAVAVKNSVNMLATLLKLPICAFVANK-EEYGDAYWTMWKYQLKECWQEAKNDYSVIKDGKRSELKKKDYPKREVAGTWKELDAKRSIIEEELEGRLSKGDENMTDSGKQEKDLEQDTTQPRTLIQRKIDYVSKLNEERDQDKCVSQIHN |
4F6U Chain:B ((47-105)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKS----IDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38191 for 376 contacts (-101.6/contact) +
2D Compatibility (PS) -5825 + (NN) 1096 + (LL) 14448
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -33122.0 ( -88.09 by residue)
QMean score : 0.210
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