Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSGESLSESGSQVAYNMRKMIREKISDGYTDEQITSELRNSYGDSIIIVPPVKFSTYILWLIPLVIPLIGCFLIRNIIK
2KW0 Chain:A ((24-97))
------------------------QFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26668 for 494 contacts (-54.0/contact) +
2D Compatibility (PS) -8586 + (NN) -7573 + (LL) 5000
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -41577.0 ( -84.16 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2KW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KW0-query.scw
PDB file :
Tito_Scwrl_2KW0.pdb
: