Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKEDLLELMKIRHSRRSYGQSKLAHQEEINMLIETAWLSPSRYGDEPWRQVICNRQSNQDAWEKLLSCPTEPNQKWAKDTQILIISLSTKNFHDHTKIVNFWGSHDTGIANYTFMLQSYIYEFNAHQMSRFDRNKIVKNSIYQMILI
4EO3 Chain:A ((151-270))
-------------RRARRALKKDRVP-REELELLIKAAHLAPSCMNNQPWRFVVVDEEELLKKIHEALPG----GNYWMKNAPALIAVHSKKDFDCALPDNRDYFLFDTGLAVGNLLVQATQMGLVAHPVAGYDPVKVKEILKIPEDHV
General information:
TITO was launched using:
RESULT:
Template:
4EO3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17844 for 793 contacts (-22.5/contact) +
2D Compatibility (PS) -12677 + (NN) -3116 + (LL) 1504
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -40133.0 ( -50.61 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_4EO3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EO3-query.scw
PDB file :
Tito_Scwrl_4EO3.pdb
: