Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLNQPIALAQKVSVDD-----CNFTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTR---ALVINNPTEMRNCPEKLITSLFPELIPPTLITENISMIRDFYHDYRGIILKPLYSYGGNDVIRI-QNENSIQVVVELMITKYKCPVIAQAFCKNV-NKDKRILLLDGQPIG-VMKRVPRVSGEIRTNLRLGASFEPVEMNDRDNEICNKIGPELKKRGLIFVGIDIVDDFLLEINITSPTGVVYINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 1GSH Chain:A ((13-312)) | ---NINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQNYEEWFSFVGEQD--LPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILKPLD----ASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLA-----------------RGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173997 for 2079 contacts (-83.7/contact) +
2D Compatibility (PS) -28549 + (NN) -6027 + (LL) 1696
1D Compatibility (HY) -25200 + (ID) 4900
Total energy: -236977.0 ( -113.99 by residue)
QMean score : 0.445
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