Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYIQILPETFSIISSLVLLLLGIVFNRRTINLLALGCTVITLIILILSAKDSGFFPFNSLLKLDLYIRSAQGLILIAGILVLLLLNLSKYDYEYEFSILILFTLFGMITLVSANNLISFYLSFELMSIPLYVLASFNKDSVYSCEAGVKYFTLSALSSCIMLYGMSLLYGYTGLVNFSELSSFLENHQMTYGIVFGLVLILIGLCFKLAIAPFHMWAPDVYQGAPTIVTAFFSTVPKAALVTFLIRFFMGEELVGVEKYFQPVLLYISALSVLISAFGALRQRNLKRLLAYSSIGHIGFILASLSIFTRMGTDSSL-IYLVIYIITNIGLFSYFIQIDDDDCSVANLSGIGKKRPVLAFHLSILLFSMAGIPPLAGFFAKLFIFKSLVNSGFIGMSLIFIVASVISCYYYLSIIKAMYFDKPSDSKVIYSKSLFIVTSVASLINIVLFMCVEDLYSLIHLVTKSL |
4HE8 Chain:N ((81-390)) | ---------------------------------------------------------------------------------------------RFEFYLLVLYAALGMHLLASTRHLLLMLVALEALSLPLYALATWRRGQ--GLEAALKYFLLGALAAAFFLYGAALFYGATG-------SLVLGAPGEGPLYALALGLLLVGLGFKAALAPFHFWTPDVYQGSPTPVVLFMATSVKAAAFAALLRVAAPPE----------ALALLVALSVVVGNLAALAQKEAKRLLAYSSIAHAGYM--ALALYT--GNAQALGFYLLTYVLATGLAFAVLSQISPDRVPLEALRGLYRKDPLLGLAFLVAMLSLLGLPPLAGFWGKYLAFAEAARAGAWGVLVLALVTSAVSAYYYLGLGLAV-FARPEETPFRPGPPWARAAVVAAGVLLLALGLLPGLVLPALAAGG-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -373307 for 2795 contacts (-133.6/contact) +
2D Compatibility (PS) -31601 + (NN) -10333 + (LL) 11652
1D Compatibility (HY) -34000 + (ID) 6050
Total energy: -443639.0 ( -158.73 by residue)
QMean score : 0.335
|
|
|