Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METDIVVIGAGPVGIFTAFQAGMLDMRCHIIDVLDQAGGQCTALYPEKPIYDIPGYPVITAQKLIEQLMEQASPFEPVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNR-PPLSGILEYENKSVFYNVNKISDFQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGSWDIQLERSRVVVDQATLRTSRDRIYAIGDVAAYLGKLKLILNGFAESTMAC-YDIYKVIHNSPVNFQYSTSKVVRGKKSDLL |
| 3AB1 Chain:A ((16-330)) | ---DLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRS-SDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVD-SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPG--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257881 for 2578 contacts (-100.0/contact) +
2D Compatibility (PS) -33182 + (NN) -10197 + (LL) 1724
1D Compatibility (HY) -24800 + (ID) 6050
Total energy: -330386.0 ( -128.16 by residue)
QMean score : 0.525
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