Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFGNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIRPDSLRGENKEKGIKGERVSYELKEERGRNGEGKKFAINLKLLED
3I2Z Chain:B ((6-69))
---GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLA----------EGQRVEFEI-----TNGAKGPSAANVTAL--
General information:
TITO was launched using:
RESULT:
Template:
3I2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11765 for 434 contacts (-27.1/contact) +
2D Compatibility (PS) -6809 + (NN) -1051 + (LL) 1064
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -25561.0 ( -58.90 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3I2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I2Z-query.scw
PDB file :
Tito_Scwrl_3I2Z.pdb
: