Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNHKNVKKMIKAIAKRTLINKMRKSKTRTAIRKLVDIIKSGNKENVTPAFRSAESNLHKCVSKGVIHKNTAARKISRLNAKVKALMTA
2ZM6 Chain:T ((20-93))
---------------KRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEA
General information:
TITO was launched using:
RESULT:
Template:
2ZM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10577 for 486 contacts (-21.8/contact) +
2D Compatibility (PS) -7811 + (NN) -2430 + (LL) 1636
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -20682.0 ( -42.56 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_2ZM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZM6-query.scw
PDB file :
Tito_Scwrl_2ZM6.pdb
: