Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
1O25 Chain:A ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDM---DEERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDIL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1O25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151981 for 1476 contacts (-103.0/contact) +
2D Compatibility (PS) -20979 + (NN) -2026 + (LL) 5728
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -193258.0 ( -130.93 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_1O25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O25-query.scw
PDB file :
Tito_Scwrl_1O25.pdb
: