Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF
1EF1 Chain:C ((28-75))
----NERVQKHLKAL-TSELANARDESKKTAND---MIHAENMRLGRDKYKTLRQIRQGN
General information:
TITO was launched using:
RESULT:
Template:
1EF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21572 for 194 contacts (111.2/contact) +
2D Compatibility (PS) -5209 + (NN) -2136 + (LL) 644
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 12671.0 ( 65.31 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_1EF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EF1-query.scw
PDB file :
Tito_Scwrl_1EF1.pdb
: