Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYKWDGKKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPT----ERLVEQTYKTRAREVGREKFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTISKETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVCESSLNTITFSTEENEQIDIATTRPELFLACVAVFCHPEDARYAHLIGKTSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELDIYWQQKHNLPMKIIIDQDGKINLDSMYDNNRSQYQGIGMTGERSTGVIKEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIKTLDQKAQVLDKVKECN--WYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPVWYSRRKGEEGKVI-LAEVEDLPVDPLKDLPKGYSKEEVVPDQDVMDTWATSAITPQLSALAVNSEFSLPDHRYNTIFPADLRSQSHEIIRTWAFYTILKAYYHANSLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRY---WTANSRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLVRKIKADNNVSVKHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 1IVS Chain:A ((3-745)) | -LPKAYDPKSVEPKWAEKWAKNPFVANPKSGKPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTR-HDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEVETEPTPGKLYTLRYEVEGGGFIEIATVRPETVFADQAIAVHPEDERYRHLLGKRARIPLTEVWIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGLKPVSVINLEGR------------------MEGE-----------------------RVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVK-DWNISRQLWWGHQIPAWYC----EDCQAVNVPRPERYLEDPTSCEACGSPR--LKRDEDVFDTWFSSALWP-LSTLGWPEE----TEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATG--GQDIRLDLRWLEMARNFANKLYNAARFVLLSREGFQAK--EDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEFCDWYLEAAK------PALKAGNAHTLRTLEEVLAVLLKLLHPMMPFLTSELYQALTGKEELALEA-WP--EPGGRDEEAERAFEALKQAVTAVRALKAEAGLPPAQEVRVYLEGETAPVEENLEVFRFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -352268 for 6129 contacts (-57.5/contact) +
2D Compatibility (PS) -77371 + (NN) -21612 + (LL) 3204
1D Compatibility (HY) -34000 + (ID) 11300
Total energy: -493347.0 ( -80.49 by residue)
QMean score : 0.393
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