Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIIAGKYRGRRIATGKHLAARPTMSIVREAVFNILSSKKIIYNLNILDLFCGSGSFSFEALSRGAKHAFIVDLDYYNLQLPEKTAKDLGITDSITLICCSANA---LPKPVSKCDIVFIDPPYYSNLVNSTLDGLANSGWLSDDALIILEVR-KNEDFQCSKNFSVILERTYGIARIIFLSLST
2FPO Chain:A ((13-182))
QIRIIGGQWRGRKLPVPDS------TDRVRETLFNWLAP--VIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRA---VSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREA
General information:
TITO was launched using:
RESULT:
Template:
2FPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141100 for 1225 contacts (-115.2/contact) +
2D Compatibility (PS) -17147 + (NN) -4373 + (LL) 820
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -174950.0 ( -142.82 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2FPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPO-query.scw
PDB file :
Tito_Scwrl_2FPO.pdb
: