Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKHTTFDAKLRTSMAENEIKRLEIDVDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
3PXU Chain:A ((7-157))
------VAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIA-NEVLGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRA---FEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEKWLTEKVAAMA-
General information:
TITO was launched using:
RESULT:
Template:
3PXU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103928 for 1129 contacts (-92.1/contact) +
2D Compatibility (PS) -15561 + (NN) -4379 + (LL) 668
1D Compatibility (HY) -15200 + (ID) 3550
Total energy: -141950.0 ( -125.73 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3PXU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PXU-query.scw
PDB file :
Tito_Scwrl_3PXU.pdb
: