Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATISAALGVMMER |
2LOR Chain:A ((60-77)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQWSLLVAVVAGSVVSYG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6253 for 77 contacts (-81.2/contact) +
2D Compatibility (PS) -2099 + (NN) -937 + (LL) 19508
1D Compatibility (HY) -1200 + (ID) 100
Total energy: 8919.0 ( 115.83 by residue)
QMean score : -0.260
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