Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQP---LVVVCHALTGNHLTYG----TDDYPGWWREII-DGGYIPIHDYQFLTFDVIGSPFGSSSPLN---------DPHFPKKLTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSRAFNEIARQAI------------HLGGKEGLSIARQLGFLTYRSSKSYDERF-----------TPDEVVAYQQHQGNKFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHIFKNLETKVLTMGFIDDLLYPDDQVRALGERFKY--HRHFFVP--DNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 2PL5 Chain:A ((19-349)) | -------------------ELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPF-VSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGK-ELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFLL--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157773 for 2420 contacts (-65.2/contact) +
2D Compatibility (PS) -31262 + (NN) -11420 + (LL) 2812
1D Compatibility (HY) -22400 + (ID) 4900
Total energy: -224943.0 ( -92.95 by residue)
QMean score : 0.456
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