Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLVVMIIVSIILFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQFMTNHMEANVISESVNEVFPNILKQLDRVKSVEIEYNQYHFQVRYSENDHCLYFFDITEQVQTNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFKRYSSDQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLGELSQSGLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARV-ISHALKDILAEGDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEAYIVLNETDID-----PTLRRVMNEIDKKSELRERFITSDDAWDMMTSKTTVVIVDTHKPELVLDEN---VLNKANRKVVIDHHRRGESFISNPLLIYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSR-TFDAASYLRAHGADTILTQHFLKDDV--DTYINRSELIRTVKVEDNGIAIAHGSDDKIYHPVTVAQAADELLSLEGIEA---------------SYVVARRED--NLIGISARSLGSVNV-QLTMEALGGGGHLTNAATQLKGVTVEEAIAQLQQAITEQLSRSEDA |
| 4PY9 Chain:A ((3-334)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKVIAQAHIDHFTK-WFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIVPNAFPDFLKWMPGSKDIL-LYDRYQEFADKLIMEAD---------VICCLDFNALKRI-DEMSDIVAASPGRKIMIDHHLYPEDFCR---ITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGID--------KDDIYRKVYNTYSE----SRLRLMGYVLSNMKVYKDYNSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE-MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYG-TMEEAVKVFEQAL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102153 for 2414 contacts (-42.3/contact) +
2D Compatibility (PS) -32772 + (NN) -13620 + (LL) 28508
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -143287.0 ( -59.36 by residue)
QMean score : 0.405
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