Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRDLTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYVSDEGKDEFNYKNMPKQTH-FVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSIQFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETLTLNQPAPPHHFSQMKKINQFGMQMYQ----------PYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
3TP9 Chain:A ((5-326)) | -YLRRFYDEGLAHASYLVGCQETGEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRAGAAICVSDEGPPEWKSEYVKAYPHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMALFSGDFVFVGDVGRPDLLERVAGESGSSEALARQMFRSLRKFEALPDHVQVLPAHGAGSACGKALGAVPSSTVGYEKLVNWALQHKDEDAFVQALLAGQPEAPIYFARMKLVNKVGPRLLAELGAPERVDLPPERVRAWREGGVVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112114 for 2645 contacts (-42.4/contact) +
2D Compatibility (PS) -33436 + (NN) -13542 + (LL) 208
1D Compatibility (HY) -26400 + (ID) 7100
Total energy: -192384.0 ( -72.73 by residue)
QMean score : 0.347
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