Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK
4ADZ Chain:A ((55-111))
-------LKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHLRHCVADA----------------------
General information:
TITO was launched using:
RESULT:
Template:
4ADZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2446 for 274 contacts (-8.9/contact) +
2D Compatibility (PS) -5834 + (NN) -157 + (LL) 2236
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -12901.0 ( -47.08 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_4ADZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ADZ-query.scw
PDB file :
Tito_Scwrl_4ADZ.pdb
: