Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIIYMNTIKNTIYTEAIFSKDEKHRYLLKKTWDEKKPACTVITMYPHLDGVLSLDLTTVLILNQLANSERYGAVYLVNLFSN-------IKTPENLKHIKEPYDKHTDIHLMK------AISESDTVILAYGAY------AKRPVVVERVEQVMEMLKPHKKKVKKLINPATNEIMHPLNPKARQKWTLKA |
4Q3L Chain:A ((32-138)) | -------------------------------------------IYYEIDGTLDINSDVIVILNGIMMSTKSWDAFVENFSKNHVLLRYDMFDQGQSSKIEESYTQTIQVELLKNLLEHLGIAQANIVGISYGASIALQFAAKYPTMIKRM----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16805 for 501 contacts (-33.5/contact) +
2D Compatibility (PS) -9186 + (NN) 1352 + (LL) 7156
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -25083.0 ( -50.07 by residue)
QMean score : 0.080
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