Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLQTMSNSIFIKNLIFAINESLEYSETNSVMEVTFQKAIGFTQYNFEGEKLKLKDDLKELISLVGREEAVLIFVNRLNEGLYCILNQLIEWDNLNYQFAMYKEAMHNYLFNTIEKLNDDTLFLLHQDGLITLPE---------HKYKTVAVKSTFGSRDFTFRFKFPEESDTVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKIPIETKNLTS |
4D4H Chain:A ((29-79)) | ------------------------------------------------------------------------------------------------------KQSIHQ-LFETQVERTPEAVAVLSEQGQLTYEELNTKANQLAHYLRTLGVKS--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4358 for 173 contacts (-25.2/contact) +
2D Compatibility (PS) -4208 + (NN) 769 + (LL) 12960
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 1663.0 ( 9.61 by residue)
QMean score : 0.112
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