Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGAPAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSP-QLVLYMGGGMIIGSML---GAFLANLFDATFVNTVYIIIALLALTLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVAN---------------SIVIAFISSIGAFVIKLIQGYIPLYDALFLIIGSIIFAPIGLKLSKKVPNIIQKWIISILIVFAIVQLIL |
| 4JR9 Chain:A ((284-418)) | ------------------------------------------------------------------------SKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALF---LTAGLGSGSTFQMISVIFR--KLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGA---------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76716 for 694 contacts (-110.5/contact) +
2D Compatibility (PS) -11364 + (NN) 633 + (LL) 12004
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -87643.0 ( -126.29 by residue)
QMean score : 0.130
|
|
|