Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFKQFYDNHLSQASYLVGCQRTGEAIIIDPVRDLSKYIEVADSEGLTITQATETHIHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMPSKT-QFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDIGRPDLLEKSVQIKGSTEISAKQMYESVQNIKNLPDYVQIWPGHGAGSPCGKALGAIPISTIGYEKINNWAFNEIDETKFIESLTSNQPAPPHHFAQMKQVNQFGMNLY------QSYDVYP----SLDNKRVAFDLRSKEAFHGGHTKGTINIPYNKNFINQIGWYLDFEKDIDLIGDKSTVEKAKHTLQLIGFDKVAGYRLPK-------------SGISTQSVHSADMTGKEEHVLDVRNDEEWNNGHLDQAVNIPHGKLLNENIPFNKEDKIYVHCQSGVRSSIAVGILESKGFENVVNIREGYQDFPESLK |
| 3TP9 Chain:A ((5-465)) | -YLRRFYDEGLAHASYLVGCQETGEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRAGAAICVSDEGPPEWKSEYVKAYPHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMALFSGDFVFVGDVGRPDLLERVAGESGSSEALARQMFRSLRKFEALPDHVQVLPAHGAGSACGKALGAVPSSTVGYEKLVNWALQHKDEDAFVQALLAGQPEAPIYFARMKLVNKVGPRLLAELGAPERVDLPPERVRAWREGGVVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPADRPIHLLAADAIAPDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVSPDEVRGA-LAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAW----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180008 for 3844 contacts (-46.8/contact) +
2D Compatibility (PS) -47588 + (NN) -22466 + (LL) 308
1D Compatibility (HY) -37200 + (ID) 9700
Total energy: -296654.0 ( -77.17 by residue)
QMean score : 0.470
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