Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHYYQPLWTLVGAGVSSLKSSRKDMESVIPE-GANWIKQAVSSFQPENNSVIL----GDNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTH------------------PNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFDVG-KYNKELERIVEERNITVNYNYNLVEIDGDKKVATFEHIKAYDRK--TISYDMLHVTPPMGPLDVVKEST--LSDSEGWVDVNPTTLQHKS--YSNVFALGDASNVPTSKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 3H8L Chain:A ((4-331)) | -------VLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGW-DKYGYS-VC---EPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIR--------EH-EIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFI---PTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHL--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148850 for 2450 contacts (-60.8/contact) +
2D Compatibility (PS) -32567 + (NN) -5286 + (LL) 6460
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -201893.0 ( -82.41 by residue)
QMean score : 0.404
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