Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVIIIFFSIGLILTTHIIIDKIKSNTK
2JR8 Chain:A ((19-40))
---------------------------------------------LRAINIAGTTHDVVSFFRPKKK
General information:
TITO was launched using:
RESULT:
Template:
2JR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2926 for 74 contacts (-39.5/contact) +
2D Compatibility (PS) -2202 + (NN) 586 + (LL) 4508
1D Compatibility (HY) -800 + (ID) 250
Total energy: -1084.0 ( -14.65 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2JR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JR8-query.scw
PDB file :
Tito_Scwrl_2JR8.pdb
: