Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVISAIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISILGRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEIHKDEATTKVVSDNTEPPIESKGHVSKKD |
| 2FNQ Chain:A ((423-470)) | --------------------------------------------------------------------------------------------------------------IYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQD-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14504 for 228 contacts (63.6/contact) +
2D Compatibility (PS) -4722 + (NN) 31 + (LL) 14580
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 21293.0 ( 93.39 by residue)
QMean score : 0.215
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