Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFYNILGVLILVMLSTDALDCDIITHLRTSLINFLPIQSLLSALKNPYC
3K9F Chain:C ((122-144))
------------IIIMTDA-DTDG-AHIQTLLLTFF--------------
General information:
TITO was launched using:
RESULT:
Template:
3K9F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8394 for 88 contacts (-95.4/contact) +
2D Compatibility (PS) -2171 + (NN) 153 + (LL) 2688
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -10574.0 ( -120.16 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_3K9F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K9F-query.scw
PDB file :
Tito_Scwrl_3K9F.pdb
: